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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9621609 chr22:33347552 A/G GCAT chr22:38203912-38213183:+ 0.5 7.7 8.16E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G GGA1 chr22:38004482-38029571:+ 0.69 9.13 1.86E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G GTPBP1 chr22:39101728-39134304:+ 0.6 7.95 1.34E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G HDAC10 chr22:50683612-50689834:- 0.48 6.92 1.44E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G HIC2 chr22:21771693-21805752:+ 0.46 6.79 3.34E-11 Box Plot
THCA rs9621609 chr22:33347552 A/G HMGXB4 chr22:35653445-35691800:+ 0.39 7.13 3.81E-12 Box Plot
THCA rs9621609 chr22:33347552 A/G HPS4 chr22:26839389-26879803:- 0.7 8.67 6.75E-17 Box Plot
THCA rs9621609 chr22:33347552 A/G HSCB chr22:29138019-29153503:+ 0.65 9.26 7.15E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G JOSD1 chr22:39081548-39097561:- 0.43 6.61 1.03E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G KLHL22 chr22:20795806-20850170:- 0.7 9.07 3.16E-18 Box Plot
THCA rs9621609 chr22:33347552 A/G L3MBTL2 chr22:41601209-41627275:+ 0.85 9.4 2.24E-19 Box Plot
THCA rs9621609 chr22:33347552 A/G LDOC1L chr22:44888452-44894178:- 0.39 6.32 5.9E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G LMF2 chr22:50941378-50946120:- 0.58 7.97 1.18E-14 Box Plot
THCA rs9621609 chr22:33347552 A/G LOC150381 chr22:46449726-46454400:+ 0.48 6.45 2.77E-10 Box Plot
THCA rs9621609 chr22:33347552 A/G LOC284900 chr22:28315364-28404267:+ 0.48 7.34 9.27E-13 Box Plot