Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
---|---|---|---|---|---|---|---|---|---|
THCA | rs9621609 | chr22:33347552 | A/G | GCAT | chr22:38203912-38213183:+ | 0.5 | 7.7 | 8.16E-14 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | GGA1 | chr22:38004482-38029571:+ | 0.69 | 9.13 | 1.86E-18 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | GTPBP1 | chr22:39101728-39134304:+ | 0.6 | 7.95 | 1.34E-14 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | HDAC10 | chr22:50683612-50689834:- | 0.48 | 6.92 | 1.44E-11 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | HIC2 | chr22:21771693-21805752:+ | 0.46 | 6.79 | 3.34E-11 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | HMGXB4 | chr22:35653445-35691800:+ | 0.39 | 7.13 | 3.81E-12 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | HPS4 | chr22:26839389-26879803:- | 0.7 | 8.67 | 6.75E-17 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | HSCB | chr22:29138019-29153503:+ | 0.65 | 9.26 | 7.15E-19 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | JOSD1 | chr22:39081548-39097561:- | 0.43 | 6.61 | 1.03E-10 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | KLHL22 | chr22:20795806-20850170:- | 0.7 | 9.07 | 3.16E-18 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | L3MBTL2 | chr22:41601209-41627275:+ | 0.85 | 9.4 | 2.24E-19 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | LDOC1L | chr22:44888452-44894178:- | 0.39 | 6.32 | 5.9E-10 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | LMF2 | chr22:50941378-50946120:- | 0.58 | 7.97 | 1.18E-14 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | LOC150381 | chr22:46449726-46454400:+ | 0.48 | 6.45 | 2.77E-10 | Box Plot |
THCA | rs9621609 | chr22:33347552 | A/G | LOC284900 | chr22:28315364-28404267:+ | 0.48 | 7.34 | 9.27E-13 | Box Plot |